Some workflows will not parse? Here's how to fix.

 You may need to tweak your server settings to allow the API to download large workflows.

Check to ensure your WAM user has access to download workflows. 

Also, you may need to increase the memory limit for tool for very large workflows on the server itself to allow it to download packages through the API. Once the change is made they need to next through and hit finish so the change takes effect. This will bounce the Alteryx Service and the Gallery will go down for about 2mins

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